Repositories list

• pySBOL2

  Public
  A pure Python implementation of the SBOL standard.

  Python

  •

  Apache License 2.0

  •88 forks•2121 stars•3333 issues•33 pull requests•Updated Aug 7, 2026Aug 7, 2026

• Excel-to-SBOL

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •99 forks•44 stars•3737 issues•11 pull request•Updated Aug 5, 2026Aug 5, 2026

• SBOLExplorer

  Public
  synthetic-biology

  synthetic-biology

  UnrealScript

  •

  MIT License

  •22 forks•55 stars•2828 issues•77 pull requests•Updated Aug 4, 2026Aug 4, 2026

• SeqTrainer

  Public
  ML training on SBOL data

  Jupyter Notebook

  •

  MIT License

  •44 forks•66 stars•22 issues•11 pull request•Updated Aug 4, 2026Aug 4, 2026

• sbol-rs

  Public
  Rust implementation of the Synthetic Biology Open Language (SBOL 3.1.0 & 2.3.0)

  Rust

  •

  Apache License 2.0

  •00 forks•44 stars•00 issues•11 pull request•Updated Aug 1, 2026Aug 1, 2026

• SbolStandardWebsite

  Public
  TeX

  •

  Creative Commons Zero v1.0 Universal

  •33 forks•44 stars•1515 issues•00 pull requests•Updated Jul 31, 2026Jul 31, 2026

• SBOL-MCP

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 30, 2026Jul 30, 2026

• SBOL-Validator

  Public
  A web application to validate SBOL files

  pythonflasksynthetic-biology+ 2

  pythonflasksynthetic-biologystandardssbol

  HTML

  •

  Apache License 2.0

  •44 forks•99 stars•1616 issues•66 pull requests•Updated Jul 24, 2026Jul 24, 2026

• SBOLCanvas

  Public
  TypeScript

  •

  Apache License 2.0

  •99 forks•1717 stars•4848 issues•1313 pull requests•Updated Jul 22, 2026Jul 22, 2026

• Xperimental-Data-Connector

  Public
  XDC uses excel2flapjack and excel2sbol and interlinks the data

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •99 forks•22 stars•66 issues•11 pull request•Updated Jul 15, 2026Jul 15, 2026

• Excel-to-Flapjack

  Public
  Jupyter Notebook

  •22 forks•00 stars•00 issues•22 pull requests•Updated Jul 9, 2026Jul 9, 2026

• SBOL-Converter

  Public
  SBOL Java Converter

  Java

  •

  Apache License 2.0

  •00 forks•22 stars•1313 issues•11 pull request•Updated Jun 11, 2026Jun 11, 2026

• sbol-script

  Public
  SBOL Script library (.js, .ts)

  TypeScript

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated May 29, 2026May 29, 2026

• sbol-owl3

  Public
  The ontology for the SBOL v3 specification

  HTML

  •

  Apache License 2.0

  •22 forks•33 stars•44 issues•00 pull requests•Updated May 29, 2026May 29, 2026

• SBOL-Data-Curation

  Public
  00 forks•11 star•33 issues•00 pull requests•Updated May 27, 2026May 27, 2026

• libSBOLj3

  Public
  A Java library for the Synthetic Biology Open Language version 3

  Java

  •

  Apache License 2.0

  •33 forks•22 stars•55 issues•00 pull requests•Updated Apr 16, 2026Apr 16, 2026

• SBOL-visual

  Public
  The reference implementation of the SBOL Visual standard

  HTML

  •

  Other

  •1818 forks•3838 stars•2828 issues•22 pull requests•Updated Mar 31, 2026Mar 31, 2026

• SBOLTestSuite

  Public
  Java

  •1010 forks•88 stars•99 issues•11 pull request•Updated Feb 26, 2026Feb 26, 2026

• SBOL-Notebooks

  Public
  A repository containing Jupyter Notebooks for SBOL

  Jupyter Notebook

  •11 fork•00 stars•1616 issues•55 pull requests•Updated Nov 5, 2025Nov 5, 2025

• SBOL-utilities

  Public
  Command-line utilities and scripts for manipulating SBOL data

  JavaScript

  •

  MIT License

  •2929 forks•2121 stars•107107 issues•1515 pull requests•Updated Oct 26, 2025Oct 26, 2025

• test-github-deploy

  Public
  Maven deployment test - Please ignore this project.

  Java

  •11 fork•00 stars•00 issues•00 pull requests•Updated Oct 16, 2025Oct 16, 2025

• Community-Media

  Public
  This repository is intended to be a "one stop" location for finding all of the publicly presented papers, posters, and talks that have been given on SBOL.

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •1313 forks•99 stars•33 issues•00 pull requests•Updated Aug 6, 2025Aug 6, 2025

• libSBOLj

  Public
  Java Library for Synthetic Biology Open Language (SBOL)

  Java

  •

  Apache License 2.0

  •2525 forks•4141 stars•6464 issues•88 pull requests•Updated Jul 12, 2025Jul 12, 2025

• tyto

  Public
  Use ontology terms in your Python application

  Python

  •

  Apache License 2.0

  •44 forks•2121 stars•2121 issues•00 pull requests•Updated Jun 6, 2025Jun 6, 2025

• SBOL-examples

  Public
  A repository to share/discuss/ask/propose how to represent examples using SBOL and SBOLVisual.

  Jupyter Notebook

  •

  Apache License 2.0

  •44 forks•33 stars•1717 issues•11 pull request•Updated May 7, 2025May 7, 2025

• Excel-utilities

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks•11 star•44 issues•00 pull requests•Updated Apr 2, 2025Apr 2, 2025

• pySBOL3

  Public
  Native python implementation of SBOL 3.0 specification

  Python

  •

  MIT License

  •2020 forks•4444 stars•4545 issues•22 pull requests•Updated Mar 26, 2025Mar 26, 2025

• sbol_factory

  Public
  The SBOLFactory provides a mechanism for automatically generating an interactive, object-oriented API from a declarative data model specification encoded in OWL…

  Python

  •

  MIT License

  •22 forks•66 stars•1616 issues•11 pull request•Updated Feb 26, 2025Feb 26, 2025

• Xperimental-Data-Connector-Server

  Public
  This runs a submission to flapjack and synbiohub from an excel file

  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •22 forks•00 stars•33 issues•22 pull requests•Updated Oct 24, 2024Oct 24, 2024

• SBOL-Devs

  Public
  SBOL Devs repository, a place to plan the software development that SBOL needs.

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 8, 2024Aug 8, 2024