v1.3.4

📝 Documentation

• clarify cupy always needs a manual install

🔄 Other

• merge dev into main

👥 Contributors

• @lguerard

v1.3.3

🐛 Bug Fixes

• workflow: wire dilate_labels' use_gpu through cfg["dilate_gpu"]

📝 Documentation

• document dilate_gpu (GPU dilation on the cluster)

🔄 Other

• merge dev into main

👥 Contributors

• @lguerard

v1.3.2

📝 Documentation

• split custom-segmentation/measurements/label-relations out
• cluster: trim snakemake.md to SLURM/cluster-specific content

🔄 Other

• merge dev into main

👥 Contributors

• @lguerard

v1.3.1

📝 Documentation

• link napari-chunked-regionprops for whole-store measurement

🔄 Other

• merge dev into main

👥 Contributors

• @lguerard

v1.3.0

✨ Features

• core: add dilate_labels post-segmentation wrapper
• workflow: wire dilate_labels into build_fn via cfg["dilate"]

📝 Documentation

• document dilate_labels, API and cluster config usage

🔄 Other

• merge dev into main

👥 Contributors

• @lguerard

v1.2.2

🐛 Bug Fixes

• napari: default view_in_napari to showing every channel

📝 Documentation

• dog: document deconvolution + DoG segmentation on SLURM

🔄 Other

• merge dev into main

👥 Contributors

• @lguerard

v1.2.1

🐛 Bug Fixes

• release: list contributors even when GitHub can't resolve a login
• packaging: pin pyqt6<6.10 in the napari extra

👥 Contributors

• @lguerard

v1.2.0

✨ Features

• plugins: add dog (deconvolution + DoG) segmentation plugin
• workflow: add cilia segmentation config (custom -> dog plugin)
• workflow: relate cilia labels to cellpose nuclei/cyto labels
• workflow: write relation output as a two-sheet Excel workbook

🏗️ Build

• deps: ️ add optional "dog" extra for pycudadecon

🐛 Bug Fixes

• release: don't crash the changelog on an unresolved contributor

📝 Documentation

• document the dog plugin
• workflow: update relation output docs for the xlsx change

👥 Contributors

• @lguerard

v1.1.1

📝 Documentation

• napari: update napari-dask-ndmeasure references to its new name

👥 Contributors

• @lguerard

v1.1.0

✨ Features

• core: persist object count for the napari plugin to skip its scan

👥 Contributors

• @lguerard